manuals in UC riverside - instructive for bioinformatician

http://manuals.bioinformatics.ucr.edu/

• R Basics Manual


• BioConductor Manual


• NGS Analysis with R/Bioconductor


• NGS Analysis with Galaxy and IGV
  


• Programming in R


• Clustering in R


• ChemmineR
  


• EMBOSS


• Linux Essentials


• IIGB's Linux Cluster Manual


• GCG - SeqLab


• Phred/Phrap/Consed

• SEED

http://manuals.bioinformatics.ucr.edu/home/ht-seq#TOC-Rsamtools-SNP-Calling