显示标签为“reproducible research”的博文。显示所有博文
显示标签为“reproducible research”的博文。显示所有博文

2012年9月8日星期六

R Markdown and Rpub

1. R Markdown
http://rstudio.org/docs/authoring/using_markdown


R Markdown enables easy authoring of reproducible web reports from R. It offers:
  • Easy creation of web reports from R that can be automatically regenerated whenever underlying code or data changes.
  • A highly accessible syntax (markdown) which lower the barriers to entry for reproducible research.
  • Output of a standalone HTML file (with images embedded directly in the file) that is easy to share using email, Dropbox, or by deploying to a web server.
  • Support for publishing dynamic and interactive web content.
This article includes an overview of how to use R Markdown within RStudio. For more specific details on syntax and implementation, see the R Markdown article.


2. Rpub
http://www.rpubs.com/

a free service that makes it easy to publish documents to the web from R. RPubs is a quick and easy way to disseminate data analysis and R code and do ad-hoc collaboration with peers.

2011年4月8日星期五

Devil in the details - discussion from Nature on reproducible research

I agree with put forward the reproducible research, at least for the data-focused study. And also, at least the raw data supporting the results should be open reachable.

http://www.nature.com/nature/journal/v470/n7334/full/470305b.html