March 26-29, 2012 -Unix ,Perl ,and Python short course
Full materials - Slides and exercises- Feb 15 2012 - Enrichment Analysis
Color slides (pdf) - December 1 2011 - RNA-seq: A practical guide to the analysis of differential gene expression
Color slides (pdf) - November 10 2011 - Assessing Sequence and Microarray Data Quality
Slides (pdf) Commands (pdf) - October 3, 4, 6 2011 - R/Bioconductor short course
Full materials - Slides and exercises - August 24 2011 - Papers2
Color handout (pdf) - May 26 2011 - An introduction to R Graphics
Color slides (pdf) B&W handouts (pdf) vignette vignette commands sample data files: 1 2 3 - April 14 2011 - Juggling Genome Coordinates
Color slides (pdf) - March 24 2011 - Analysis of next generation sequencing experiments with Galaxy
Color slides (pdf) - Feb 17 2011 - RNA-Seq Methods and Applications
Color slides (pdf) - January 13 2011 - Analysis of ChIP-seq experiments
Color slides (pdf) - December 2 2010 - Mapping Next Generation Sequence Reads
Color slides (pdf) - November 18 2010 - Integrative Genomics Viewer (IGV)
Color slides (pdf) - November 4 2010 - Querying Biological Databases with SQL
Color slides (pdf) - September 2010 - An introduction to R
Color slides (pdf) B&W handouts (pdf) vignette vignette commands sample data Biostatistics vs. Lab Research (video) - May 2010 - UCSC Genome Browser
Color slides (pdf) Handouts (pdf) - Apr 2010 - Visualizing Networks: Cytoscape
Slides (pdf) - March 2010 - Gene list enrichment analysis
Color slides (pdf) Handouts (pdf) - Feb 2010 - BIOBASE Knowledge Library & Human Gene Mutation Database Slides (pdf)
- Jan. 2010 -UNIX
Powerpoint Slides Slides (pdf) compressed files for class and exercises exercises and answers - December 2009 - Galaxy
Powerpoint Slides Slides (pdf) - November 2009 - Creating Phylogenetic Trees with MEGA
Slides (pdf) MEGA Quick Start - October 2009 - Searching for transcription factor binding sites with TRANSFAC
Slides - September 2009 - Getting the most out of Entrez
Handout - June, 2009 - Introduction to ENSEMBL
Slides - May 5, 2009 - Tools for Motif and Pattern Searching
Slides (pdf) - March 24, 2009 - An Introduction to Protein Structure Viewers (esp. Swiss-PdbViewer)
Slides Demo topics Detailed demo - February 24, 2009 - An Introduction to GraphPad Prism - statistics and graphing software
Slides - January 22, 2009 & January 27, 2009 - Relational Databases for Biologists, Filemaker Pro and MySQL
- December 8, 2008 - Tips and Tricks with Excel
Color Slides Demo.xls - November 20, 2008 - Cool BaRC Web Tools
Slides handout - October 27, 2008 - Identifying and displaying differentially expressed genes
Color slides B&W slides (6/page) - September 15, 2008 - GeneGo: Bioinformatics Technology for Systems Biology
- August 26, 2008 - Browsing the Genome
Powerpoint Slides handouts - June 19, 2008 - Speed up your research with LSF
Powerpoint Slides sample commands for submitting mutiple jobs - May 15, 2008 - Ingenuity's Pathway Analysis
- April 9, 2008 - CERF: Electronic Lab Notebook
- March 20, 2008 - Clustering and Displaying Microarray Data
Powerpoint Slides sample data matrix - January 29, 2008 - Unix Tips and Tricks - Part 1
Powerpoint Slides exercises solutions - August 8, 2007 - Orthologous Gene Searching
Powerpoint Slides January 18, 2007 - Matlab Statistics Toolbox
Powerpoint Slides sample data filesOctober 12, 2006 - Overview of Genome Browsers
PDFUseful site for UCSC Genome Browser slides and rVISTA slides OpenHelix.comMay 24, 2006 - Tips for aligning and annotating multiple sequences
PDFJanuary 25, 2006 - What's New in BLAST?
Powerpoint SlidesDecember 13, 2005 - Tips and Tricks with Excel
PDFOctober 27, 2005 - Beginning Perl PDF
2012年5月7日星期一
course materials for bioinformatic topics
http://jura.wi.mit.edu/bio/education/hot_topics/
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