An Example Differential Expression Analysis Using RNA-Seq Data This is an example analysis of RNA-seq data using open source tools R and Bioconductor. It starts with raw reads downloaded from the Short Read Archive (SRA), does quality assessment and improvement, mapping, and analysis

https://github.com/vsbuffalo/rna-seq-example

This is an example analysis of RNA-seq data using open source tools R and Bioconductor. It starts with raw reads downloaded from the Short Read Archive (SRA), does quality assessment and improvement, mapping, and analysis.