2012年10月6日星期六

VAT - useful tool for VCF and NGS data analysis

http://vat.gersteinlab.org/documentation.php


Contents

  1. VAT Core Modules
    1. snpMapper
    2. indelMapper
    3. svMapper
    4. genericMapper
    5. vcfSummary
    6. vcf2images
    7. vcfSubsetByGene
    8. vcfModifyHeader
  2. Auxiliary programs
    1. gencode2interval
    2. interval2sequences
  3. External programs
    1. bgzip/tabix
    2. VCF Tools
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